Showing posts with label drupe. Show all posts
Showing posts with label drupe. Show all posts

Wednesday, November 18, 2015

Give Thanks For The Cranberry

Biology concepts – epigynous berries, seed dispersion, scarification, drupe, endocarp


Ocean Spray alone sells 86.4 million cans of jellied cranberry
sauce each year. No matter which sauce you prefer, I bet it
has a lot of added sugar. Cranberries alone are tart enough
to shrink your head.
Cranberry sauce is a Thanksgiving staple, but it’s a lot like fruitcake at Christmas – you either love it or hate it. Let me give you some reasons to love it.

Cranberry (Vaccinium macrocarpon) is one of very few commercially grown fruits native to North America. The vine needs cool temperatures and acidic, sandy soil conditions, so New England, Southern Canada and the Pacific Northwest are prime growing locations. Similar latitudes in Europe also support growth of cranberries (Vaccinium oxycoccus) in their bogs. We have previously talked about bogs where the acid conditions preserve human remains and produce bog mummies.

But there is an exception in the Southern Hemisphere – Chile in South America. In the northern part of Southern Chile, volcanic ash soils mimic the sandy soils of peat bogs, both in consistency and acidity. Runoff from the Andes Mountains allows for water, and the temperatures are similar to those in Washington and Oregon - perfect for cranberry growing.

The Ocean Spray Company harvests berries in North America in autumn, but it needs berries in the summer too. In January of 2013, Ocean Spray bought the cranberry processing interests in Chile. The harvesting period in Chile is March to May, just in time to supplement Ocean Spray’s dwindling supplies.

Cranberries are tart compared to other fruits; they have five times as much acid as their close cousins, the blueberries. Why? It may be the acidic soils they grow in. In terms of evolution, growing in peat bogs was a good choice. Not many things can grow in a bog, so competition is low. Competition for what is the question – there is very little nitrogen in the soil of a bog, and the water is acidic too.

Plants need fresh water and nitrogen to survive, so the cranberry evolved better nitrogen tapping mechanisms, as well as leaves and stems that can retain their fresh water very well. Not many other organisms have adapted to these conditions, but the cranberry thrives, transferring the acids to its leaves, stems and fruits.

This is the bog copper butterfly (Lycaena epixanthe) that
lives its entire life on a cranberry vine. It not only survives
the acidic condition of the plant – it eats it up. It lays its eggs
on the under side of the leaf, and the pupa and the larva can
survive a flood that covers the plant for months.

This acidity is also a help when it comes to pests. Several acidic compounds have been isolated from V. macrocarpon that stop insects from eating the leaves and stems. I’m guessing insects don’t like Sour Patch Kids. The exception is the butterfly Lycaena epixanthe; it spends its entire life feeding on the cranberry plant.

The second reason for the high acid content of the cranberry is that it doesn’t need to be sweet. The blueberry is much sweeter, but it  has to be. Blueberry bushes spread their seeds by having birds, rodents, or humans eat them one place and excrete them in their feces somewhere else; sweetness promotes consumption.

Seed dispersal is the most basic reason for any plant producing a fruit. If a seed falls directly beneath the parent plant, no one wins. Both patent and child will require the same nutrients, and they will end up competing for everything. Things would also get very crowded.

Several mechanisms of seed dispersal have evolved. Wind is a popular way to disperse seeds. You’ve seen those helicopter seeds from Maple trees – they catch the air and twirl down vertically, but also move horizontally. Sycamore trees have tufts on their seeds to catch the wind as well.

Fruiting is also a way to disperse seeds. Animals need carbohydrates, and fruits are an important source for many animals. When they eat the fruit, they also eat the seeds. Later on, the animal grabs a copy of Sports Illustrated, locks the door, and deposit the seeds somewhere else.


These are some of the types of fruits. The peach is a drupe. It
has an edible mesocarp. The coconut is also a drupe, but its
mesocarp is more fibrous (flake coconut). The tomato is a true
berry. It’s pericarp and locules or all edible. The raspberry is an
aggregate fruit, many ovules and mesocarps held together. The
raspberry is also a drupe, which you know when you get those
seeds stuck in your teeth. Each little fruit is a druplet.
In fact, some seeds must pass through the digestive tract of an animal in order to germinate. Some seeds, like those of drupes (drupa = overripe olive), have a hard endocarp (seed coat), derived from the ovary wall. In fact, that’s what makes a drupe a drupe. Fruits like peaches, almonds, coconuts, olives, are considered drupes and each little part of a blackberry or raspberry is a druplet.

The germinating embryonic plant isn’t strong enough to break through the drupe endocarp on its own. Something must be done to weaken the endocarp. The weakening (scarification) may come from scratching the surface, freeze/thaw, fire (for the Ponderosa Pine), or perhaps from the digestive enzymes of an animal. Many berries, like blackberries, currants, and raspberries require digestive scarification in order to germinate. But the cranberry isn’t one of these berries.

Why don’t cranberries need to be eaten for seed dispersal? Because they float! When the bog (or similar sandy wetland) floods, the berries are carried away from the parent plant, away to some far off place that may or may not be suitable for cranberry vine growth. That’s the problem with floating; you gotta go with the flow.

Cranberries float because they have air pockets trapped within them. Floating fruit isn’t that exceptional, apples float too. It’s a good thing; think how may lives this has saved during bobbing for apples season!

On top we see the coconut – it’s a drupe with a tough exocarp.
You can see the germinating plant coming through one of the
eyes. Seed dispersal for the coconut is shown on top right. We
don’t know where palms come from originally, because they
could spread around the world in just one generation. The
cranberry also floats, because of the air pockets shown on the
bottom right. The frog is just a bonus – cute, huh?

Given their bouyancy, it amazes me that it wasn’t until the 1960’s that someone thought of flooding the bogs in order to harvest the cranberries. They have machines that shake the vines and release the ripe berries.

Cranberry plants grow very low to the ground, they have long runners (rhizomes), that can extend six or more feet from the parent vines, and these can sink roots to become new plants. Because of their short stature, it only takes about 18 inches of water to flood a cranberry bog for the wet harvest. So those commercials with the two goobers standing waist high in water in their waders are a bit of a stretch.

The cranberry was probably at the first Thanksgiving; they are hearty and ready to be harvested just about the time we are sitting down to our turkey and stuffing.  But, the pilgrims misled us – the cranberry isn’t a real berry! And don’t say it was because the pilgrims were from across the ocean. The cranberry is closely related to the European lingonberry, so the mistake had already been made.

The cranberry is a false berry, also called an epigynous berry (epi = in addition to, and gynous = ovary). A berry is a fleshy fruit derived from a single ovary. False berries develop from an inferior ovule and contain tissues from parts of the flower other than the ovary, while true berries develop from superior ovary tissue only (see picture). Other examples of epigynous berry-producing plants are bananas, coffee and cucumbers.


Here is one difference between real and false berries. All true
berries are hypogynous, where the ovary (in red) is above
where the petals and pistil come out. False berries have an
inferior ovary. Another difference is that the true berry is
made from only the ovary, while the false berry incorporates
other parts of the flower. Below on the left is the red currant,
and on the right is the cranberry. As a berry, the currant is true
and the cranberry is false. But really, can you tell the difference?
The V. macrocarpon false berry fruit is indispensible as a Thanksgiving sauce, but medicine has found other uses for cranberry compounds. In the first 10 months of 2013 alone there were 86 papers published on the merits of cranberry compounds.

Most people who know about medicinal cranberries have had a urinary tract infection (UTI). For a hundred years or so, old wives (and young wives) have espoused the virtues of cranberry juice in preventing or treating UTIs.

Recent years have seen many studies try to validate the home remedy. As for if cranberries work, there is evidence on both sides. Hundreds of published reports say it’s the best thing since sliced bread, and hundreds say it doesn’t do a darn thing. Such is science – and that’s a good thing. Argue away so we know we get it right in the end.

One 2013 study found that sweetened dried cranberries added to the diet made a real difference in women who were susceptible to UTIs. Half the women in the study didn’t have even one UTI while on the study, and they all had reduced numbers of incidents.

As for why caranberries may work, scientists first thought it was the acid that killed the UTI-causing bacteria. Then it was believed that cranberry compounds prevented the attachment of the bacteria to the wall of the urogenitial epithelium via the bacterial fimbriae (appendages for attachment). This may actually be true, but other actions are also possible.

Another 2013 study showed that for the UTI causative agent Proteus mirabilis, eating powdered cranberry was very effective for preventing UTI. In this experiment, the researchers found that the organisms did not swim well or swarm when exposed to cranberry compounds. In fact, the gene that expresses proteins for their flagella (for motility) were inhibited by cranberry powder.

In addition, their urease virulence factor was also suppressed. A virulence factor is any molecule that helps an infectious organism to colonize and/or obtain nutrition from a host, or helps it to evade or suppress the host immune system.

This is a dividing bacterium showing the fimbriae that help it
attach to surfaces. You can see the difference between these
and the flagella that help in the motility of the organism. It
may be that cranberry compounds mess with both to
prevent UTIs.

Not to be a downer, but a different group carried out a meta-analysis (an organized compilation of many studies involving a lot of statistical math) of many cranberry/UTI studies in 2013 and determined that cranberry compounds have no effect on the prevention or treatment of UTIs. So, all that talk about just how cranberry molecules suppress UTIs (fimbriae, acid, down regulation of host molecules) can be ignored if you don't believe they work.

The news is better on other fronts. In obese men, cranberry juice was able to inhibit the stiffening of blood vessels, an important factor in development of cardiovascular disease (CVD). The effect was greatest in men with metabolic syndrome – a combination of high blood pressure, blood glucose, and cholesterol, as well as obesity.

A second study confirmed this by showing that 1 cup of cranberry juice each day reduces blood glucose levels and CVD risk in men with type II diabetes. And this is just the beginning; 2013 studies also show how cranberry compounds may help you age well – this makes sense, some vines have been producing cranberries since before the American Civil War. Other studies show that cranberry is a potent anti-viral agent as well as preventing bacterial UTIs. Respect the berry – uh, false berry!

Next week, let’s talk about another symbol of Thanksgiving, the indian corn that you think is just decorative is actually a fascinating story of discovery.



Burleigh AE, Benck SM, McAchran SE, Reed JD, Krueger CG, & Hopkins WJ (2013). Consumption of sweetened, dried cranberries may reduce urinary tract infection incidence in susceptible women -- a modified observational study. Nutrition journal, 12 (1) PMID: 24139545

McCall J, Hidalgo G, Asadishad B, & Tufenkji N (2013). Cranberry impairs selected behaviors essential for virulence in Proteus mirabilis HI4320. Canadian journal of microbiology, 59 (6), 430-6 PMID: 23750959

Lorenzo AJ, & Braga LH (2013). Use of cranberry products does not appear to be associated with a significant reduction in incidence of recurrent urinary tract infections. Evidence-based medicine, 18 (5), 181-2 PMID: 23416416

Ruel G, Lapointe A, Pomerleau S, Couture P, Lemieux S, Lamarche B, & Couillard C (2013). Evidence that cranberry juice may improve augmentation index in overweight men. Nutrition research (New York, N.Y.), 33 (1), 41-9 PMID: 23351409

Shidfar F, Heydari I, Hajimiresmaiel SJ, Hosseini S, Shidfar S, & Amiri F (2012). The effects of cranberry juice on serum glucose, apoB, apoA-I, Lp(a), and Paraoxonase-1 activity in type 2 diabetic male patients. Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences, 17 (4), 355-60 PMID: 23267397


For more information or classroom activities, see:

Seed dispersal mechanisms –

Scarification –

Different types of fruits –

Fimbriae and flagellae –



Wednesday, August 27, 2014

Let’s Chew The Fat

Biology concepts – lipid, saturation, fruit, vegetable, drupe, berry, mesocarp, cotyledon, tuber, fatty acid, triglyceride


To try and get blood from a stone dates back to the 1600’s,
meaning to try and do the impossible. It was first used in a
book by Giovanni Toriano called The Second Alphabet. As far
as the turnip goes, it may relate to a story in the Bible of Cain
and Abel making sacrifices – one a vegetable and one an animal.
The vegetable sacrifice was not as appropriate since it could
not drip blood. Now we often use the phrase for the inability of
getting someone to pay money.
Did you ever hear or use the phrase, “You can’t get blood from a stone?” Sometimes the phrase goes, “You can’t squeeze blood from a turnip.” Item one - gross. Item two, where did the phrases come from? (see picture caption) Basically, they both mean the same thing. You can’t harvest something that wasn’t there to begin with. I use it with creditors – they can’t get money from me if I don’t have any.

You can’t harvest what isn’t there, so that leads to today’s question. If plants are low fat sources of nutrition, how can we use them for cooking oils? There’s corn oil, sunflower oil, cottonseed oil, canola oil, rapeseed oil, olive oil, even coconut oil. How can such low fat organisms provide us with so much fat?

Of course every cell has fats – there are the phospholipids in the cell membrane, and phytophormones made from lipids help the cells communicate and the plant respond to stimuli. Thylakoid membranes for photosynthesis have a lipid (MGDG) that normally doesn’t form a bilayer, but does in the thylakoid. Please refer to this post to show that lipids have a role in almost every cellular activity.

Unfortunately, we don’t get oil from the whole plant, just a little part of it. And even more amazing, the part we get oil from only exists for a short time in the plant’s yearly cycle. When we say vegetable oil, we really mean fruit oil.

The fruit is the part of the plant that grows from the flower after fertilization, including the seed(s). The vegetable is all the other parts of the plant, including the flower bud before it is fertilized. Now you know the true difference between fruits and vegetables.

The fat in plants is almost always associated with its attempt to reproduce itself. Part of the fruit may be fatty, the seed of the fruit may be fatty, or even the germinating plant inside the fruit could be the source of the fat.


The upper image shows the different parts of the berry fruit
avocado. The mesocarp is the part we eat and contains the
fats. The same is true for the olives below. These have had
their seeds removed and replaced with a piece of pimento.
Maybe they thought we wouldn’t notice. No, they can’t grow
them with the pimento there already, but it might be
something Bill Blazejowski could work on, like his idea to
feed mayonnaise to the tuna in the 1982 movie, Nightshift.
Let’s start with the easiest – fruits that are high fat. The oldest is the most famous – olives. The fleshy part of the fruit, the part we eat, is called the mesocarp. In olives, up to 85% of the weight of the mesocarp is fat in the form of triglycerides. Olives have been grown for eating and pressing oil since about 6000 BCE. Olive cultivation predates written language and even teenage vampire movies.

Avocados are also pressed for oil. In locales where olives are harvested part of the year, avocados can be harvested year round, so many olive oil producer make avocado oil when the olives aren’t in season. Even though we use the mesocarp of each fruit for oil, the olive is a type of fruit called a drupe, while the avocado is actually a single-seeded berry. The avocado is just about the only berry from which we harvest edible oil.

In people with metabolic and liver function changes due to diabetes or other parts of a metabolic syndrome, it is known that the monounsaturated fatty acids in olive oil help to normalize many biochemical markers of liver function in people with metabolic syndrome. A 2014 study now expands that to avocado oil. It contains many monosaturated fatty acids, and the researchers found that it has similar positive effects on biochemical metabolic markers as compared to olive oil.

Oil palm (Elaeis guineensis or E. oleifera) fruit are also high in fat. The mesocarp is pressed to make palm oil that is used for eating and cooking, especially in Africa. The seed (kernel) can also be harvested for oil, and this is called palm kernel oil. The differences between the oil from the mesocarp and from the kernel lie in their color (the fruit oil is reddish while the kernel oil is colorless) and the percentage of saturated fats. The kernel oil is higher in saturated (no double bonds) fat.

These differences have an good side for us. Palm kernel oil esters have been shown to pass the blood brain barrier (BBB, see this post) better than other oil esters. So in a 2013 study, the palm kernel esters were combined with the antibiotic chloramphenicol. The resulting emulsion showed properties that could make it useful for treating bacterial meningitis, because more of the antibiotic could be carried across the BBB.


The mesocarp of the coconut is not edible. See the fibrous
stuff being cut away from the coconut? That’s the mesocarp,
or coir. It does have other uses though. You can make good
rope from it, or perhaps you would be more interested in some
biodegradable flower pots – all made with coir.
Another type of palm oil is also used in cooking. Coconut palm oil is pressed from the flaky coconut meat that makes german chocolate cake so irresistible. But the meat isn’t the mesocarp of the coconut fruit. You wouldn’t want to eat the mesocarp of a coconut; it’s the fibrous brown covering that has to be peeled away to get to the nut.
The coconut meat is the endosperm of the seed – the more it grows, the more of the liquid endosperm (coconut milk) turns solid. It turns solid because it is more saturated fat, and like most saturated fats it is more likely to be solid at room temperature. Coconut oil is sometimes used in place of butter.
Other “vegetable” oils come from different parts of the fruit. Sunflower oil uses the entire seed, including the embryonic plant, the endosperm and skin layers – outer (exocarp) and inner (endocarp).
Canola oil is pressed from the seeds of the canola plant. Canola is a plant bred from a type of rape plant, a member of the mustard family. Therefore, there's a really no difference between rapeseed oil and canola oil. The name "canola" was thought up in the 1970’s, using “Can” from Canada, because that is where it was developed, and “ola” as a term for oil. The word “rape” didn’t seem to help sales.

The top cartoon shows how the cotyledons can have different
fates. The brown oval cotyledons can become the first leaves in
epigeal growth, or can stay below ground in hypogeal growth.
Either way, they help the germinating plant get a good start. The
peanuts below show the cotyledons, the big parts we eat, as well
as the germinating plant. The red arrows point to the peanut
nibs; they’re actually the plumule and radicle (stems and root) of
the embryonic plant.
Drupe fruits like olives seem to make good oil. Drupes also include plants like peanuts and soybeans. However, these are different than olives. The fat from most drupes and whole seeds are found in the embryonic leaves, called cotyledons. They often serve as the first leaves of the baby plant, but they also store fat and carbohydrates for the germinating plant.
It occurs to me that the examples above are equal and opposite. On one hand, the fat of peanuts, soybeans, sunflowers, rapeseeds, and coconut serve to nourish the embryonic plant. Fat is a great idea for this function because it stores a large amount of energy in a small volume. Carbohydrates require water for storage, so they take up more room.
On the other hand, the fat of avocados, palm oil fruits and olives are enticements to other animals to eat the fruit. Why do the fruits “want” to be eaten, anthropomorphism aside? The answer - to disperse the seeds held within or on the fruits.
New plants do better when they are far enough away from the parent plant that they will not have to compete with them for resources and sunlight, especially since they will be smaller and in the shade. This is why seeds need to be dispersed. Nourishment for itself or nourishment for a predatory animal, these are two completely different functions for the fat, but both are held in the fruit.


The corn kernel is the fruit of the maize plant. There is starch
(glucose chains), gluten (protein) and the germ, which is the
germinating plant with a single cotyledon. The bottom drawing
shows the difference in constituents of different varieties of corn.
Sweet corn has more sugar, while dent corn has a higher germ to
endosperm ratio.
Given the high enough fat contents of the plant components described above, it makes sense that we could use them for oils. But what’s one of the most common “vegetable” oils used for both cooking and biodiesel? I’ll give you a hint – you probably enjoy some of this fat at the movies.

Yes, corn it is, both as your popcorn and the margarine you slather all over it. We already know that corn is amazing (see this post), but only 10% of corn is fat (dry it and 20% is fat). The sweet corn you eat is a special hybrid that contains more endosperm and less fat, but dent corn is the one used for making oil and feeding livestock. The corn kernel is mostly starch and glucose, but the embryonic plant has the fat. This is called the corn germ and is the only part used to make oil. The germ contains the cotyledon (called a scuttelum for corn) that stores fat for the germinating plant (get it? Germ = germinating plant)

Look at the bottom picture to see how small the germ of the corn kernel is. Because of this, it takes 40 bushels of dried dent corn kernels (at 56 pounds/bushel) to make 500 ml (0.85 lb) of corn oil! It must be cheap to grow corn because that isn’t a very good ratio, yet corn oil isn’t that expensive.


Tiger nut sedge looks a lot like a grass and is considered a weed
in many places. It was cultivated as far backs as 3000 years ago
in Egypt and has been used in cooking for just as long. The tubers
on top left can be eaten as a root vegetable, and are high in
monounsaturated fats. The dried tubers (bottom) can be ground
into flour or used as a spice. However, we might just start to grow
them for biodiesel. I’d line up to buy a tiger nut fueled car – that’s
really putting a tiger in your tank! (a 1960’s Esso gasoline slogan)
Even though this is a summer post, there’s no reason we can’t talk about an exception. Today, it’s sedge oil. The tiger nut sedge (Cyperus esculentus) is being considered as a viable source for biodiesel, but it's used in African cooking as well. Sedge plants reproduce in several ways. They have fruits, but they aren’t significantly high in fat. They have rhizomes and well, but we’re interested in their tubers (serves the same function as a potato).

The tubers are fairly high fat, and they’re a heck of a lot larger than corn germ. On a per plant basis, sedge produce much more oil, which will make C. esculentus a cheaper source of fuel if farmed on a global scale. In truth, since sedge oil comes from a part of the plant other than the fruit, it’s the only true “vegetable” oil we talked about today. I wonder - could we get oil from a turnip? Maybe that’s the blood we should be looking for.

Next week, we'll start a series of posts on just how bacteria get around using flagella. Can flagella be used to prove the existence of a universal designer?



Carvajal-Zarrabal O, Nolasco-Hipolito C, Aguilar-Uscanga MG, Melo Santiesteban G, Hayward-Jones PM, & Barradas-Dermitz DM (2014). Effect of dietary intake of avocado oil and olive oil on biochemical markers of liver function in sucrose-fed rats. BioMed research international, 2014 PMID: 24860825
 
Musa SH, Basri M, Masoumi HR, Karjiban RA, Malek EA, Basri H, & Shamsuddin AF (2013). Formulation optimization of palm kernel oil esters nanoemulsion-loaded with chloramphenicol suitable for meningitis treatment. Colloids and surfaces. B, Biointerfaces, 112, 113-9 PMID: 23974000