Showing posts with label visual. Show all posts
Showing posts with label visual. Show all posts

Wednesday, December 9, 2015

Snow Saves Lives

Biology concepts – subnivean zone, chionophiles, antifreeze proteins, UV vision, snow blindness, photokeratitis


Rudolph the red nosed reindeer didn’t start as a song or
even a Rankin and Bass stop motion special. It was a story
published by the Montgomery Ward Stores.  The author’s
brother-in-law was Johnny Marks, the king of Christmas
songs. He adapted the story into a song that was recorded
by Gene Autry in 1949. Then it went viral. The TV
special didn’t appear until 1964.
Rudolph with his nose so bright – only he could lead Santa’s sleigh through the snowstorm. What a great mutation, a beaming red nose – although that might be quite the draw for predators. In real life, reindeer have indeed evolved to overcome the snow, but also to rely on it. You could even speculate that Rudolph would die without the snow.

This leads a biologist to ask, "Just who and what is depending on the snow; how does snow affect the living world?" Many animals have snow in their name, but that isn’t always a good clue. The snowy egret and the snow crab are examples.

The snowy egret is called that only because of its white plumes, while the snow crab is so named because its hunting season is when the snow is the deepest. Mike Rowe, the hardest working man in show business since James Brown, taught watchers of The Deadliest Catch that the snow crab is better called the opilio crab (Chionoecetes opilio). Fisherman that go to sea to put them on your table are a breed unto themselves.

Egrets and crabs don’t help us to investigate the question of the effects of snow on life. The easy observation is that snowy winters are something that organisms have evolved to overcome or even use to their advantage. They have developed ways to survive the harsh conditions of the snowy season or to exploit the white stuff.


The snow leopard is unique amongst cats. It has blue-green or
gray eyes, while most other cats have yellow or black eyes. It
also can’t roar. It has a partially ossified (turned to bone)
hyoid cartilage, which was thought to be the key to cat roars,
but it just can’t manage more than a screech. Maybe it just
doesn’t feel like roaring – or maybe it fears an avalanche.
The snow leopard (Panthera uncia) is an animal that overcomes snow. It has evolved large paws to act as snowshoes. The snow leopard can easily stalk prey and run in snow as deep as 36 in (1 m). Their paws also have fur on all surfaces, to insulate their footpads from the cold and wet snow.

On the other hand, their markings are better suited for their preferred living and hunting grounds. They aren’t nearly as white as you would expect. They like to live on rocky ledges and they descend into the forests to hunt prey when the weather gets really cold (because that’s where the prey are), so their brown tints and spots help them blend in to both habitats.

The lemming is an example of a small mammal that exploits the snow for cover, others being mice, voles, and shrews. The Norway lemming (Lemmus lemmus) moves from the low mountainsides up to higher elevations (opposite of the snow leopard for obvious reasons) as the snow falls. They don’t live underground, although they may nest there, but they don’t live on top of the snow either.

The lemmings dig vast networks of tunnels in the snow where it meets the ground. This is called the subnivean environment (sub = below, and niveus is Latin for snow), and they race around looking for vegetation to eat and other lemmings with which to mate. The many openings in the snow may seem to be doors to the subnivean environment, but the lemmings rarely come out of the snow. They are more likely vents to release carbon dioxide from lemming breath and plant decomposition.

Lemmings don’t jump off cliffs in large numbers when they
get older. That is a myth. However, they may be a little
challenged when they run for new feeding grounds in great
numbers – some seem to find their way to cliffs and accidently
go over head first. They are solitary except for mating times,
as is seen here. He’s taking flowers to his girl.

Some animals, like some big cats and large owls have evolved a hearing sense that allows them to pinpoint lemmings under the snow, but the subnivean tunnels work well enough that lemming populations usually skyrocket every 3-4 years, and then plummet as resources become scarce. Their success is in some ways their downfall.

And speaking of falling, the lemmings are also responsible for some human tragedies. When the temperatures fluctuate and the tunnels remodel with ice and snow, the layers of snow can become unstable. The dense snow above the tunnel system will crush and slide off the subnivean layer and …. look out below, here comes the avalanche. And I thought skiers that flock to resorts in order to fall off the mountain repeatedly were the lemmings!

You wouldn’t expect it, but some small arthropods (insects and such) have found ways to live in the snow. When a warmer winter day pops up, so do the snow fleas (Hypogastrura nivicola). You will see them as black specks on the snow – appearing in the thousands at the bases of trees. They aren’t really fleas at all, but a species of springtail (see picture). The reason they come out is not known exactly, but I think that any snow melt due to warmth might drown them in their below ground hiding places.

On the left is a convention of snow fleas discussing the merits
of elm leaves as decaying foliage – or maybe that’s the buffet.
On the right is a single snow flea, called a springtail. The back
legs can apply a load and then are released. They spring from
place to place, but they aren’t “fleaing.”

Snow fleas have an antifreeze protein that keeps them alive over the winter. This isn’t an exception, many animals have chemical mechanisms to prevent freezing, but the protein in snow fleas is unlike any other. The snow flea anti-freeze protein (sfAFP) may serve humans as well. See the post here for more on anti-freezing mechanisms, and here to show that snow midges are the largest animals in many parts of cold Antarctica.

A 2008 project produced the protein in a laboratory and showed that it may be possible to use it to preserve organs for transplant a longer time. Storage at cooler temperatures would allow for longer shelf lives for organs, but they can become damaged by ice crystal formation. The researchers also made a version of the protein using D-amino acids. We have talked about these before – but here they work to our advantage, by making the protein less susceptible to enzymatic degradation, while still providing antifreeze function.           

Snow melt mosquitoes, on the other hand, are winged. Living from northern California up to the arctic tundra, snowpool Aedes mosquitoes (many species) lay their eggs and their larvae develop in the pools of melted snow as the weather warms. This gives them a head start on the rest of the mosquito world. It would seem many forms of life have found ways to exploit snow.

Watermelon snow is caused by an alga that grows in the
snow. Chlamydomonas nivalis is a green algae, but it also
produces a lot of anthocyanins (red) pigments. They
absorb the sunlight and generate heat. This melts some
of the snow and gives the algae the water it needs to grow.
The algae serves as a food source for other animals
during the winter, including the snow fleas.

Then there are the chionophiles (chioni is Greek for snow, and phile = lover). We have talked about the psychrophiles, organisms that prefer cold temperatures, but chionophiles need the snow to survive.

It may seem counterintuitive, but many organisms need the snow to keep them warm. It’s the wind that blows heat away from around the skin, so a layer of snow actually helps trap heat and protect form the wind. Lemmings give snow a big thumbs up (if they have thumbs) for snow as an insulator.

It isn’t just animals that need a “blanket” of snow to retain heat and protect from the wind. Winter wheat needs the snow, but for several reasons. Sure, the snow provides insulation for the young shoots that were planted in the late fall and go dormant until the spring. Nothing worse than frozen wheat.

But the snow also provides a source of water when it melts. This loosens the ground to give the wheat plants strength to push through the earth, and for early water for growth. Snow also gives stability to the young plants out on the plains. Lots of wind out there, enough to knock down and break the fragile plants when they are young. A cast of snow surrounding the stem helps keep them upright. The wise man says, “ Rain versus snow, the wheat doesn’t know the difference, but the farmer wants snow in the winter.”


Winter wheat is susceptible to grey snow mold, even though
it can produce antifungal compounds. This can decimate
entire crops of wheat, especially if the snow fall lasts deep
into the spring. The bottom image shows a close up of pink
snow mold on grass. This is a particular problem on golf
courses – I’m not going to cry over that.
Growing in the snow has also created a problem for wheat, a problem caused by another snow grower. Snow molds (gray or pink) remains dormant in the summer, and only start growing when covered by a layer of snow. As the snow melts in the spring, the damage is down, causing circular patches of gray or brown grass, including wheat, which is a grass.

Snow mold doesn’t attack plants on exposed soil – but they may be killed by the more extreme temperature. They do attack where there is snow, and there is more damage in the deeper snow banks – it seems they do their damage under cover of snow only – more snow, longer time for complete melt, more damage.

The snow mold excretes its antifreeze proteins, not to prevent itself from freezing, but to keep ice crystals from forming or altering around the fungus. Perhaps they are protecting their food to keep it growing and a good source of nutrients; often that food is wheat. But wheat also has tricks. A 2002 study shows that winter wheat produces several proteins that inhibit the growth of the mold.

Now back to Rudolph. To understand his exception with snow, we first need to talk about photokeratitis (photo = light, keratin = the protein found in cornea, and it is = inflammation), better known as snow blindness. For Eskimos and other humans, the 90% of the sunlight’s UV waves bouncing off the snow is enough to burn the cornea and lead to fuzzy vision or even blindness. The cornea is a protective structure, keeping the UV rays from injuring the retina.


This is part of the study that discovered UV vision in
reindeer. I get the part where they examine the retina,
but what I need to know is how they get them to read
the lines of letters on the eye chart.
Other animals are prone to snow blindness as well. Polar bears have a nictating membrane to protect the eye, but the reindeer have gone much further. Of all the mammals, only the reindeer actually sees in the UV range.

Their cornea doesn’t stop UV rays from entering the eye, yet they don’t suffer damage. The pigments of their retina absorb the energy and convert it into images, just like our eye does with visible light only. A good study would determine how they are protected – you work on that. It might be related to a new study that shows that reindeer eyes change color with the seasons, becoming blue in winter.

Being able to see in the UV range is what saves the reindeer. Predators that blend in with the snow still show up easily in UV, and well as urine stains in the snow that mark the territories of predators or other reindeer. Using his UV vision, the reindeer is better protected from predation. And it only works because of the snow – no snow, no reflected UV light. And thus we learn…. snow saved Christmas.

Next week, the biology of one of the original Christmas gifts.



Hogg C, Neveu M, Stokkan KA, Folkow L, Cottrill P, Douglas R, Hunt DM, & Jeffery G (2011). Arctic reindeer extend their visual range into the ultraviolet. The Journal of experimental biology, 214 (Pt 12), 2014-9 PMID: 21613517

Kondo H, Hanada Y, Sugimoto H, Hoshino T, Garnham CP, Davies PL, & Tsuda S (2012). Ice-binding site of snow mold fungus antifreeze protein deviates from structural regularity and high conservation. Proceedings of the National Academy of Sciences of the United States of America, 109 (24), 9360-5 PMID: 22645341

Pentelute BL, Gates ZP, Dashnau JL, Vanderkooi JM, & Kent SB (2008). Mirror image forms of snow flea antifreeze protein prepared by total chemical synthesis have identical antifreeze activities. Journal of the American Chemical Society, 130 (30), 9702-7 PMID: 18598026

Kuwabara C, Takezawa D, Shimada T, Hamada T, Fujikawa S, & Arakawa K (2002). Abscisic acid- and cold-induced thaumatin-like protein in winter wheat has an antifungal activity against snow mould, Microdochium nivale. Physiologia plantarum, 115 (1), 101-110 PMID: 12010473



For more information or classroom activities, see:

A great book on the mechanisms of survival in the winter and how cold and snow affect life is entitled
           Winter World, The Ingenuity of Animal Survival
           Bernd Heinrich
           2003
           ecco publishing, an imprint of Harper-Collins
           ISBN 0-06-019744-7

Snow blindness –

Reindeer –

Subnivean layer –

Winter wheat –

Snow mold –

Watermelon snow -



Wednesday, September 14, 2011

Why does your telephone have two holes? – Perspective on our Senses

We all know that we have five senses: seeing, hearing, tasting, touching, and smelling. Anyone disagree? Wanna put some money on it?

 


The five senses. Are these all there are? Notice how
four of the five are located on your face.

Our senses are the ways that we receive information about the world. Everything we know, feel, and interact with comes to us in  just a few select ways. And the ways we send out information are even more limited.


Would you consider all your senses of equal importance - which one would you hate most to lose? Neurophysiologically, humans are sight (visual sense) dominant. Thirty to forty percent of our cerebral cortex is devoted to vision, as compared to 8 percent for touch or just 3 percent for hearing (auditory sense).

Even though touch claims only 8% of our brain’s real estate, the tactile sense is really humans’ second dominant sense. Why do you think babies stick everything in their mouths? Our lips and tongue are the most sensitive areas for touch; the little ankle biters are just gathering information in the best way they know how at that point in their development.


Helen Keller was the first blind/deaf person in
America to graduate from college.
One of the most famous examples of how our senses affect our lives, but don’t have to control our lives, is Helen Keller. At the age of 19 months, Helen lost her sight and hearing as a result of an infection (probably rheumatic fever or meningitis).

Helen lost her most dominant sense (sight), but retained and made good use of her other dominant sense (touch). She even learned to speak by using touch – her fingers on her teacher's lips and throat help her to mimic the movements and vibrations. In general, Helen lost her ability to transduce (change energy from one form to another) waves of energy. Light waves could not be detected or changed to electrochemical nerve impulses, and neither could sound waves. 

Even without her abilities to sense waves, Ms. Keller retained her ability to sense chemicals and change those molecule/receptor interactions into nerve impulses that could be interpreted as taste (gustatory sense) or smell (olfactory sense). And she still had her important sense of touch.


There are many components included in our sense
of touch: pressure, pain, hot, cold.


Our sense of touch is actually a system of different inputs. Some scientists don’t lump them together, and state that humans actually have 10 senses. We have sensors that detect pressure (touch), hot, cold (yes, in terms of receiving information, hot and cold are different), nociception (pain), kinesthetic awareness (stretch receptors in our muscles tell us where our limbs are in space), and a vestibular sense or balance (in our ears we have the semicircular canals that tells us about where our head is in space).

Finally, some scientists consider the coordination of our inputs (proprioception) to be an 11th  sense. Any physical task that would require visual inputs of your position, balance inputs from your semicircular canals, and kinesthetic inputs from your muscles in order to make the proper responses would use proprioception – for example, most circus acts….. or motherhood. Since proprioception is a coordination of senses and not a direct intake of information about the world, I will let you decide if you think it belongs in the same category as the others.  Do you still think we have only five ways to bring in information?


Telephones are designed this way
because we talk and hear in two
different places.
Now let’s consider the opposite activity- sending out information. I offer no answer, but I like pondering the reasons why evolution developed some systems just for inputs and different systems for outputs. Take the telephone question in the title of this post. We take in and interpret sound waves through our ears, but we make sound waves with the muscles of our throat and diaphragm. Imagine what your smart phone might look like if your ears and mouth weren’t located so close to one another!

Not only are our input and output systems different, but the ways we transmit information are even more limited than the few ways we extract information. The principal way we send out information is by our muscular movements. Our muscles move us into and out of other people’s visual field, and our body’s posture, action, and expressions can also transmit information visually.

Muscles move our larynx to control the frequency of the sound waves that are generated by our diaphragm muscle pushing air out of our lungs. Our muscles also control our physical interaction with others; they can feel the pressure when me move to touch them. Sometimes our muscles generate enough pressure to cause pain.

Maybe we could provide more information if we were a cannibal’s meal (“She might not have had good taste, but she sure tasted good!” - Don Johnson in A Boy and His Dog). Bill Cosby always said he wouldn’t eat tongue because he didn’t want to taste anything that might taste him back.


The vomeronoasal organ, if adults have one,
is located forward of the olfactory bulb.
Finally, we might also communicate by the pheromones we produce. These are chemicals sensed by the vomeronasal organ (VNO), a part of the smell sense not associated with the olfactory bulb (see cartoon). Pheromones certainly affect social and physiologic behavior in lower animals; scent trails laid down by ants help the next ant find food or home. Hunters take advantage of pheromones to attract male deer or elk, as spiders use them to attract male moths to their web. But pheromone function in humans is more controversial. 


There are many companies that are more than willing to sell you pheromone concoctions aimed at increasing the physical attraction between a guy and a gal, but the latest research is equivocal at best.  Adult humans may retain a small VNO (up to 70% of adults show a VNO organ) and a gene for pheromone reception has been found to be expressed in the VNO.  Infants may sense and discriminate their mothers from other adults using pheromones.

Related to possible pheromone receptors in the VNO, recent research has shown that the human nose actually contains solitary chemosensory cells, with their receptors and signal pathways. This means that you have taste cells in your nose for umami, sour and bitter tastes! The purpsoe for these is not to taste the compounds that excite the receptors, but to signal that irritants are present. The signal pathways then trigger the trigeminal reflexes to get rid of noxious irritants - sneezing, watering eyes, runny nose, etc. Bitter receptors cells are most plentiful in the VNO, while the others are spread out evenly throughout the nasal mucosa.


Let’s review.
1. We have considerably more than five senses, but the actually number is a matter of some dispute. We settled on 10 senses for this post, but some scientists go all the way up to 17; and this doesn’t include seeing dead people or having common sense!
2. Our systems for inputs from the world don’t overlap with our outputs of information to the world. Our retinas and visual cortex don’t give off light, our smell receptors don’t produce odors, and our touch sensors don’t push on other people.

However, there is one of our senses that actually is a two-way street – you knew the exception was coming, didn’t you?  I won’t give it away, but we will HEAR about this exception in the next post.


Braun T, Mack B, Kramer MF (2011). Solitary chemosensory cells in the respiratory and vomeronasal epithelium of the human nose: a pilot study. Rhinology, 49 (5), 507-512



For more information, classroom activities or laboratories about the senses, proprioception, or pheromones:

Senses –

more than five senses –

proprioception –

pheromones –